Class VariantFileIterator

All Implemented Interfaces:
Iterable<Variant>, Iterator<Variant>
Direct Known Subclasses:
BedFileIterator, BigBedFileIterator, VariantTxtFileIterator

public abstract class VariantFileIterator extends MarkerFileIterator<Variant>
Opens a sequence change file and iterates over all sequence changes
Author:
pcingola
  • Constructor Details

    • VariantFileIterator

      public VariantFileIterator(String fileName, Genome genome)
    • VariantFileIterator

      public VariantFileIterator(String fileName)