Package org.snpeff.binseq.indexer
Interface OverlapFilter<T extends BinarySequence>
- All Known Implementing Classes:
OverlapFilterCompareAllAll
,OverlapFilterDnaId
public interface OverlapFilter<T extends BinarySequence>
Indicate whether an overlap between two sequences should be considered or not
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Method Summary
Modifier and TypeMethodDescriptionboolean
considerOverlap
(T seq1, T seq2) Consider overlap between two sequences?
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Method Details
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considerOverlap
Consider overlap between two sequences?- Parameters:
seq1
-seq2
-- Returns:
- true if sequences should be considered for overlapping
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